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Douglas-fir and Pinus taeda v1.0 Transcriptomes loaded into GBrowse | Literature pipeline recently updated to integrate sequence data | DiversiTree custom TreeGenes interface expanded to deliver phenotype data |

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Genomic Resources for Forest Tree Species

The listing below provides a comprehensive inventory of the genetic resources available for the forest tree species represented in the TreeGenes database. To get more information, click on the genus name of interest to expand the list of species. For more options to access the data enumerated here, click on the species name. If you would like to submit data to us, please direct your submissions here. We are happy to assist you with any questions you may have.

SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter ABIES 96 921 8858 690 1183 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Abies alba 52 562 8858 84 1183 Abies amabilis 4 Abies balsamea 12 Abies beshanzuensis 13 Abies bracteata 22 Abies cephalonica 2 Abies concolor 359 15 Abies fabri 32 Abies fargesii 28 Abies firma 87 Abies fraseri 17 Abies grandis 17 55 Abies holophylla 1 45 Abies homolepis 22 Abies kawakamii 2 Abies koreana 21 Abies lasiocarpa 32 Abies magnifica 1 14 Abies mariesii 14 Abies nebrodensis 3 Abies nephrolepis 3 36 Abies nordmanniana 4 Abies numidica 9 Abies pinsapo 6 Abies procera 1 Abies sachalinensis 8 28 Abies sibirica 14 51 Abies spectabilis 13 Abies veitchii 18 ACACIA 11569 21 48 1 507 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Acacia acradenia 1 Acacia acuminata 5 Acacia adunca 1 Acacia ampliceps 1 5 Acacia aneura 2 Acacia angusta 1 Acacia anthochaera 1 Acacia aphanoclada 1 Acacia aphylla 1 Acacia arabica 10 Acacia arenaria 1 Acacia assimilis 1 Acacia atkinsiana 1 Acacia aulacocarpa 1 Acacia auriculiformis 2 5 Acacia auriculiformis x Acacia mangium 2459 13 48 22 Acacia ayersiana 1 Acacia bancroftii 1 Acacia binervata 1 Acacia blakelyi 1 Acacia boliviana 2 Acacia brachystachya 1 Acacia brevispica 3 Acacia bulgaensis 1 Acacia calamifolia 1 Acacia calcicola 1 Acacia camptoclada 1 Acacia catechu 6 Acacia catenulata 1 Acacia caven 7 Acacia chiapensis 4 Acacia chinchillensis 1 Acacia chrysocephala 1 Acacia cochlearis 1 Acacia cognata 1 Acacia colei 1 Acacia conferta 1 Acacia confusa 9 Acacia crassicarpa 1 Acacia cultriformis 1 Acacia curranii 1 Acacia cyperophylla 1 Acacia dangarensis 1 Acacia dealbata 1 Acacia deanei 1 Acacia declinata 1 Acacia decurrens 1 Acacia denticulosa 1 Acacia drepanolobium 4 Acacia elata 2 Acacia empelioclada 1 Acacia eriocarpa 1 Acacia erioloba 2 Acacia erubescens 3 Acacia euthycarpa 1 Acacia exuvialis 22 Acacia fasciculifera 1 Acacia fulva 1 Acacia furcatispina 1 Acacia galpinii 3 Acacia genistifolia 1 Acacia glaucoptera 1 Acacia glomerosa 2 Acacia gonoclada 1 Acacia grandicornuta 3 Acacia greggii 1 Acacia guinetii 1 Acacia haematoxylon 1 Acacia hindsii 6 Acacia hockii 1 Acacia incurva 1 Acacia jibberdingensis 1 Acacia jonesii 1 Acacia karroo 7 Acacia koa 15 Acacia laeta 1 Acacia lateriticola 1 Acacia latisepala 1 Acacia leiocalyx 1 Acacia leiophylla 1 Acacia leucoclada 1 Acacia ligulata 1 Acacia lineata 1 Acacia longifolia 30 Acacia lycopodiifolia 1 Acacia lysiphloia 1 Acacia mackeyana 1 Acacia mangium 9110 5 1 59 Acacia mearnsii 3 Acacia melanoxylon 34 Acacia mellifera subsp. detinens 1 Acacia mellifera subsp. mellifera 1 Acacia merrickiae 1 Acacia microbotrya 1 Acacia mitchellii 1 Acacia modesta 1 Acacia monticola 1 Acacia myrtifolia 1 Acacia neovernicosa 1 Acacia nervosa 1 Acacia nigrescens 21 Acacia nigricans 1 Acacia nilotica 39 Acacia notabilis 1 Acacia nuperrima 1 Acacia nyssophylla 1 Acacia olgana 1 Acacia pachyacra 1 Acacia pachycarpa 1 Acacia parramattensis 1 Acacia parvipinnula 1 Acacia pennatula 5 Acacia penninervis 1 Acacia pentadenia 1 Acacia platycarpa 2 Acacia podalyriifolia 1 Acacia pruinocarpa 1 Acacia pulchella 2 Acacia ramulosa 1 Acacia redolens 2 Acacia retivenea 1 Acacia roemeriana 1 Acacia rossei 1 Acacia saligna 11 Acacia schottii 1 Acacia schweinfurthii 6 Acacia scleroxyla 1 Acacia senegal 6 Acacia seyal 3 Acacia siculiformis 1 Acacia silvestris 1 Acacia spectabilis 1 Acacia spondylophylla 1 Acacia suaveolens 1 Acacia tenuifolia 5 Acacia tortilis 25 Acacia translucens 1 Acacia tumida 1 Acacia victoriae 1 Acacia wanyu 1 Acacia willardiana 4 ACMOPYLE 10 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Acmopyle pancheri 7 Acmopyle sahniana 3 ACTINOSTROBUS 1 9 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Actinostrobus acuminatus 2 Actinostrobus pyramidalis 1 7 AFROCARPUS 13 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Afrocarpus falcatus 8 Afrocarpus gracilior 5 AGATHIS 1 204 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Agathis atropurpurea 2 Agathis australis 75 Agathis borneensis 4 Agathis dammara 1 65 Agathis lanceolata 9 Agathis macrophylla 2 Agathis microstachya 3 Agathis montana de laub. 1969 2 Agathis moorei 7 Agathis obtusa 1 Agathis ovata 3 Agathis palmerstonii 1 Agathis robusta 28 Agathis vitiensis 2 AMENTOTAXUS 1 56 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Amentotaxus argotaenia 1 27 Amentotaxus formosana 11 Amentotaxus yunnanensis 18 ARAUCARIA 10 3 523 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Araucaria angustifolia 10 2 14 Araucaria araucana 35 Araucaria bernieri 28 Araucaria bidwillii 28 Araucaria biramulata 32 Araucaria columnaris 38 Araucaria cunninghamii 36 Araucaria excelsa 4 Araucaria heterophylla 1 38 Araucaria humboldtensis 23 Araucaria hunsteinii 14 Araucaria laubenfelsii 19 Araucaria luxurians 28 Araucaria montana 35 Araucaria muelleri 1 Araucaria nemorosa 36 Araucaria rulei 34 Araucaria schmidii 30 Araucaria scopulorum 27 Araucaria subulata 23 ATHROTAXIS 24 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Athrotaxis cupressoides 8 Athrotaxis laxifolia 7 Athrotaxis selaginoides 9 AUSTROCEDRUS 1 10 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Austrocedrus chilensis 1 10 AUSTROTAXUS 7 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Austrotaxus spicata 7 CALLITRIS 3 16 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Callitris columellaris 1 3 Callitris endlicheri 1 Callitris macleayana 1 3 Callitris preissii 3 Callitris rhomboidea 1 6 CALLITROPSIS 3 31 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Callitropsis nootkatensis 3 20 Callitropsis vietnamensis 11 CALOCEDRUS 1 38 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Calocedrus decurrens 1 20 Calocedrus formosana 4 Calocedrus macrolepis 14 CASTANEA 9571 19 248 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Castanea dentata 91 1 24 Castanea mollissima 9480 18 224 CATHAYA 3 227 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Cathaya argyrophylla 3 227 CEDRUS 1 309 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Cedrus atlantica 33 Cedrus deodara 1 256 Cedrus libani 20 CEPHALOTAXUS 2 312 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Cephalotaxus drupacea 6 Cephalotaxus fortunei 1 25 Cephalotaxus hainanensis 15 Cephalotaxus harringtonia 30 Cephalotaxus latifolia 2 Cephalotaxus mannii 23 Cephalotaxus oliveri 9 Cephalotaxus sinensis 1 33 Cephalotaxus wilsoniana 169 CHAMAECYPARIS 6702 7 170 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Chamaecyparis formosensis 805 2 17 Chamaecyparis lawsoniana 17 Chamaecyparis obtusa 5897 4 79 Chamaecyparis pisifera 1 56 Chamaecyparis thyoides 1 CRYPTOMERIA 57658 338 3 1455 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Cryptomeria fortunei 15 Cryptomeria japonica 57658 338 3 1440 CUNNINGHAMIA 407 5 1 60 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Cunninghamia lanceolata 407 5 1 60 CUPRESSUS 11 694 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Cupressus abramsiana 11 Cupressus arizonica 2 125 Cupressus atlantica 10 Cupressus austrotibetica 5 Cupressus bakeri 9 Cupressus benthamii 1 Cupressus cashmeriana 7 Cupressus chengiana 18 Cupressus corneyana 3 Cupressus duclouxiana 20 Cupressus dupreziana 5 Cupressus forbesii 6 Cupressus funebris 1 18 Cupressus gigantea 10 Cupressus glabra 6 Cupressus goveniana 8 Cupressus jiangeensis 5 Cupressus lusitanica 6 Cupressus macnabiana 10 Cupressus macrocarpa 8 Cupressus montana 5 Cupressus pygmaea 7 Cupressus sargentii 8 Cupressus sempervirens 8 367 Cupressus sp. hhg-2001 2 Cupressus stephensonii 6 Cupressus tonkinensis 3 Cupressus torulosa 5 DACRYCARPUS 1 28 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Dacrycarpus compactus 2 Dacrycarpus cumingii 1 Dacrycarpus dacrydioides 2 Dacrycarpus imbricatus 1 20 Dacrycarpus vieillardii 3 DACRYDIUM 1 47 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Dacrydium araucarioides 3 Dacrydium balansae 3 Dacrydium cupressinum 5 Dacrydium franklinii 23 Dacrydium guillauminii 3 Dacrydium pierrei 1 10 DISELMA 1 6 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Diselma archeri 1 6 EUCALYPTUS 108841 160 9 12 1174 1 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Eucalyptus aff. vicina FSP-2005 2 Eucalyptus alba 2 Eucalyptus amygdalina/salicifolia 1 Eucalyptus baileyana 2 Eucalyptus bicostata 54 4 Eucalyptus blakelyi/blakelyi Maiden 2 Eucalyptus botryoides 1 6 Eucalyptus brachyandra 2 Eucalyptus brassiana 2 Eucalyptus camaldulensis 28 46 Eucalyptus chloroclada/chloroclada (Blakely) L.A.S.Johnson et K.D.Hill 2 Eucalyptus cinerea/cinerea F.Muell. ex Benth. 3 Eucalyptus cordata 1 9 Eucalyptus cupularis/cupularis C.A.Gardner 2 Eucalyptus deanei/deanei Maiden 2 Eucalyptus deglupta 3 Eucalyptus diversicolor 2 Eucalyptus flindersii/flindersii Boomsma 2 Eucalyptus globulus 28893 45 1 125 Eucalyptus globulus subsp. globulus 2 292 Eucalyptus grandis 42575 48 2 6 464 Genome Eucalyptus grandis x Eucalyptus nitens 44 Eucalyptus guilfoylei 1 Eucalyptus gunnii 19841 8 55 Eucalyptus haemastoma 1 Eucalyptus hallii 2 Eucalyptus howittiana/howittiana F.Muell. 2 Eucalyptus infera/infera A.R.Bean 2 Eucalyptus jacksonii 2 Eucalyptus kitsoniana/kitsoniana Maiden 4 Eucalyptus lehmannii/lehmannii (Schauer) Benth. 2 Eucalyptus major/major (Maiden) Blakely 2 Eucalyptus marginata 6 Eucalyptus melliodora 9 Eucalyptus microcorys 2 Eucalyptus nitens 2 2 2 9 Eucalyptus notabilis/notabilis Maiden 2 Eucalyptus nudicaulis/nudicaulis A.R.Bean 2 Eucalyptus occidentalis 2 6 Eucalyptus ovata 2 Eucalyptus pauciflora 2 Eucalyptus pellita 8870 1 Eucalyptus perriniana 2 10 Eucalyptus pilularis 20 21 Eucalyptus raveretiana/raveretiana F.Muell. 2 Eucalyptus risdonii 2 Eucalyptus rodwayi 2 Eucalyptus rubida 2 Eucalyptus rudis/rudis Endl. 1 Eucalyptus saligna 2 12 Eucalyptus scias/scias L.A.S.Johnson et K.D.Hill 1 Eucalyptus stoatei 2 Eucalyptus tereticornis 1131 1 4 1 Eucalyptus tetragona 1 Eucalyptus urophylla 7431 1 3 24 Eucalyptus vernicosa 2 Eucalyptus vicina/vicina L.A.S.Johnson et K.D.Hill 2 FAGUS 31406 15 2 562 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Fagus crenata 87 5 158 Fagus engleriana 12 Fagus grandifolia 10 63 Fagus grandifolia subsp. mexicana 5 Fagus hayatae 10 Fagus japonica 9 Fagus longipetiolata 7 Fagus lucida 13 Fagus sylvatica 31309 10 2 283 Fagus sylvatica subsp. hohenackeriana 1 Fagus sylvatica var. atropunicea 1 FALCATIFOLIUM 3 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Falcatifolium papuanum 1 Falcatifolium taxoides 2 FITZROYA 1 6 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Fitzroya cupressoides 1 6 FOKIENIA 1 19 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Fokienia hodginsii 1 19 GLYPTOSTROBUS 1 45 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Glyptostrobus lineatus 16 Glyptostrobus pensilis 1 29 GNETUM 10724 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Gnetum gnemon 10724 HALOCARPUS 61 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Halocarpus bidwillii 2 Halocarpus biformis 3 Halocarpus kirkii 56 JUGLANS 5213 24 60 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Juglans regia 5213 24 60 JUNIPERUS 10 495 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Juniperus ashei 3 66 Juniperus californica 6 Juniperus chinensis 16 Juniperus coahuilensis 5 Juniperus communis 57 Juniperus deltoides 5 Juniperus deppeana 6 Juniperus drupacea 8 Juniperus formosana 4 Juniperus indica 8 Juniperus macrocarpa 3 Juniperus occidentalis 6 Juniperus osteosperma 6 Juniperus oxycedrus 1 24 Juniperus phoenicea 29 Juniperus pinchotii 5 Juniperus procera 10 Juniperus przewalskii 61 Juniperus pseudosabina 5 Juniperus rigida 2 17 Juniperus sabina 2 Juniperus saltillensis 9 Juniperus sp. qiu 1 Juniperus thurifera 5 Juniperus tibetica 22 Juniperus virginiana 4 109 KETELEERIA 9 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Keteleeria evelyniana 9 LARIX 966 17 662 16248 1 669 912 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Larix chinensis 2 Larix czekanowskii 1 Larix decidua 662 16248 231 912 Larix gmelinii 899 8 73 Larix griffithiana 28 Larix himalaica 6 Larix kaempferi 67 4 1 36 Larix laricina 53 Larix lyallii 13 Larix mastersiana 19 Larix occidentalis 92 Larix potaninii 20 Larix sibirica 3 51 Larix sp. 1 Larix speciosa 6 Larix sukaczewii 26 Larix x marschlinsii/x eurolepsi 2 11 LEPIDOTHAMNUS 8 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Lepidothamnus fonkii 2 Lepidothamnus intermedius 1 Lepidothamnus laxifolius 5 LIBOCEDRUS 2 13 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Libocedrus bidwillii 1 5 Libocedrus plumosa 3 Libocedrus yateensis 1 5 MANOAO 2 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Manoao colensoi 2 METASEQUOIA 2 79 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Metasequoia glyptostroboides 2 79 MICROBIOTA 59 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Microbiota decussata 59 MICROCACHRYS 7 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Microcachrys tetragona 7 MICROSTROBOS 8 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Microstrobos fitzgeraldii 7 Microstrobos niphophilus 1 MILLETTIA 10 125 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Millettia pinnata (a.k.a. Pomgamia pinnata) 10 125 NAGEIA 74 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Nageia fleuryi 2 Nageia nagi 64 Nageia nankoensis 3 Nageia wallichiana 5 NEOCALLITROPSIS 4 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Neocallitropsis araucarioides 4 NOTHOTSUGA 1 19 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Nothotsuga longibracteata 1 19 PAPUACEDRUS 6 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Papuacedrus papuana 6 PARASITAXUS 1 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Parasitaxus ustus 1 PHYLLOCLADUS 44 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Phyllocladus alpinus 18 Phyllocladus aspleniifolius 9 Phyllocladus glaucus 1 Phyllocladus hypophyllus 3 Phyllocladus toatoa 2 Phyllocladus trichomanoides 11 PICEA 542513 1021 4 753 8777 19 30467 877 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Picea abies 14345 156 3 753 8777 9 2003 859 Picea alcoquiana 17 Picea asperata 46 Picea brachytyla 36 Picea breweriana 24 2 Picea chihuahuana 22 Picea crassifolia 27 Picea engelmannii 17 16 Picea engelmannii x Picea glauca 28174 15 16 Picea engelmannii x Picea sitchensis Picea farreri 36 Picea glauca 313353 210 1 3 2025 Picea jezoensis 3 1 92 Picea jezoensis subsp. hondoensis 1 Picea koraiensis 32 Picea koyamae 14 Picea likiangensis 37 605 Picea likiangensis var. balfouriana 10 Picea likiangensis var. hirtella 1 Picea likiangensis var. likiangensis 10 Picea likiangensis var. linzhiensis 11 Picea mariana 4 89 1 737 Picea martinezii 10 Picea maximowiczii 14 Picea maximowiczii var. senanensis 1 Picea mexicana 5 Picea meyeri var. meyeri 1 Picea meyeri var. mongolica 1 Picea morrisonicola 1 214 Picea neoveitchii 16 Picea obovata 45 Picea omorika 3 1 62 Picea orientalis 16 Picea pungens 31 Picea purpurea 20 292 Picea retroflexa 16 Picea rubens 5 44 Picea schrenkiana 18 239 Picea shirasawae 1 Picea sitchensis 186637 463 4 23588 Picea smithiana 1 43 Picea spinulosa 29 Picea torano 17 PILGERODENDRON 1 9 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Pilgerodendron uviferum 1 9 PINUS 456384 453 75513 283479 32 20583 103919 37 22087 19003 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Pinus albicaulis 657 87 25 Pinus aristata 623 89 10 Pinus armandii 140 Pinus attenuata 70 Pinus ayacahuite 86 Pinus balfouriana 15 628 207 27 Pinus banksiana 36379 1 164 Pinus brutia 2 88 Pinus bungeana 1 104 Pinus canariensis 74 Pinus caribaea 3 1 80 Pinus cembra 711 11849 88 860 Pinus cembroides 594 101 Pinus clausa 80 Pinus contorta 42087 5 1 712 1 305 Pinus coulteri 94 Pinus cubensis 77 Pinus culminicola 82 Pinus dalatensis 76 Pinus densiflora 3316 10 130 Pinus discolor 86 Pinus douglasiana 95 Pinus durangensis 11 Pinus echinata 107 103 Pinus edulis 98 Pinus elliottii 150 3 1259 14264 123 2503 Pinus engelmannii 98 Pinus fenzeliana 6 Pinus flexilis 99 53 Pinus gerardiana 229 Pinus glabra 77 Pinus greggii 81 Pinus griffithii 93 Pinus halepensis 5 956 Pinus hartwegii 168 Pinus heldreichii 82 Pinus hwangs-hanensis 89 Pinus jeffreyi 709 99 Pinus johannis 86 Pinus koraiensis 756 Pinus lambertiana 1 201099 6 778 10060 761 6843 Pinus lawsonii 76 Pinus leiophylla 83 Pinus longaeva 646 39 Pinus luchuensis 139 Pinus lumholtzii 74 Pinus massoniana 8 113 Pinus maximartinezii 86 Pinus monophylla 1 164 Pinus montezumae 87 Pinus monticola 38 731 246 Pinus morrisonicola 84 Pinus mugo 714 18147 291 935 Pinus muricata 696 82 Pinus nelsonii 170 Pinus nigra 1 130 Pinus occidentalis 74 Pinus oocarpa 12 Pinus palustris 1 89 Pinus parviflora 28 Pinus patula 23 85 Pinus peuce 106 Pinus pinaster 34262 22 3 1201 11929 3 1439 Pinus pinceana 90 Pinus pinea 326 1 120 Pinus ponderosa 1 147 Pinus pringlei 74 Pinus pseudostrobus 88 Pinus pumila 100 Pinus pungens 78 Pinus quadrifolia 79 Pinus radiata 8717 42 4 1262 14238 4 1886 Pinus remota 91 Pinus resinosa 4 700 132 Pinus rigida 86 Pinus roxburghii 91 Pinus sabiniana 1 92 Pinus serotina 82 Pinus sibirica 83 Pinus squamata 75 Pinus strobiformis 117 Pinus strobus 2 231 Pinus sylvestris 666 98 75513 3 1182 16216 6 3926 Pinus sylvestris/Heterobasidion annosum 1689 Pinus tabulaeformis 4 164 Pinus taeda 328662 182 82380 9 7511 7216 23 2550 7501 Pinus taiwanensis 93 Pinus teocote 6 Pinus thunbergii 4 1 606 Pinus torreyana 10 Pinus tropicalis 77 Pinus virginiana 111 Pinus washoensis 23 Pinus yunnanensis 1 179 PLATYCLADUS 1 27 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Platycladus orientalis 1 27 PODOCARPUS 1 1 225 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Podocarpus acutifolius 3 Podocarpus aff. degeneri mtloftybg 1 1 Podocarpus aff. insularis 1 Podocarpus aff. pilgeri 1 Podocarpus annamiensis 2 Podocarpus brassii 3 Podocarpus chinensis 23 Podocarpus coriaceus 3 Podocarpus costalis 2 Podocarpus cunninghamii 3 Podocarpus dispermus 3 Podocarpus drouynianus 3 Podocarpus elatus 6 Podocarpus fasciculus 3 Podocarpus forrestii 2 Podocarpus gnidioides 3 Podocarpus grayae 3 Podocarpus hallii 1 Podocarpus henkelii 4 Podocarpus latifolius 3 Podocarpus lawrencii 8 Podocarpus longifoliolatus 3 Podocarpus lucienii 3 Podocarpus macrophyllus 1 27 Podocarpus matudae 5 Podocarpus milanjianus 4 Podocarpus nakaii 2 Podocarpus neriifolius 8 Podocarpus nivalis 3 Podocarpus novae-caledoniae 3 Podocarpus nubigenus 4 Podocarpus oleifolius 9 Podocarpus parlatorei 1 Podocarpus polyspermus 3 Podocarpus polystachyus 3 Podocarpus salignus 4 Podocarpus smithii 3 Podocarpus spinulosus 3 Podocarpus totara 56 POPULUS 349672 3000 68 2 84 140804 1 2492 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Populus alba 162 20 1 360 Populus alba x Populus tremula var. glandulosa 10005 20 25 Populus balsamifera 162 2 3632 Populus ciliata/ciliata wall. ex royle 12 Populus deltoides 14661 28 68 8 228 Populus euphratica Populus euphratica/diversifolia/diversifolia Schrenk ex Fisch. & C.A.Mey./euphratica Olivier 13979 54 20 118 Populus fremontii x Populus angustifolia 5410 3 3 Populus hopeiensis/hopeiensis Hu & H.F.Chow 35 4 4 Populus nigra 1125 Populus simonii/simonii Carriere 4 2 2 Populus simonii x Populus nigra 9349 1 4 Populus sp. UG-2006 10 Populus suaveolens/suaveolens Fisch. 9 14 Populus szechuanica/szechuanica C.K.Schneid. 1 Populus tomentiglandulosa 1650 Populus tremula 37313 32 3377 Populus tremula x Populus alba 15315 82 567 Populus tremula x Populus tremuloides 76160 75 352 Populus tremuloides 1 Populus trichocarpa 89943 419 1 43 131271 Genome 1367 Populus trichocarpa x Populus deltoides 45399 2070 704 Populus trichocarpa x Populus nigra 20130 12 12 Populus wilsonii/wilsonii C.K.Schneid. 1 Populus x canadensis 10157 7 10 105 Populus yunnanensis/yunnanensis Dode 2 PRUMNOPITYS 16 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Prumnopitys andina 3 Prumnopitys ferruginea 2 Prumnopitys ferruginoides 2 Prumnopitys ladei 5 Prumnopitys taxifolia 4 PSEUDOLARIX 1 29 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Pseudolarix amabilis 29 Pseudolarix kaempferi 1 PSEUDOTAXUS 1 12 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Pseudotaxus chienii 1 12 PSEUDOTSUGA 3788 211 51548 5 720 5988 1 4395 1 1291 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Pseudotsuga japonica 14 Pseudotsuga macrocarpa 1 254 Pseudotsuga menziesii 3788 209 51548 5 720 5988 1 3902 Transcriptome 1291 Pseudotsuga sinensis 1 16 Pseudotsuga wilsoniana 209 QUERCUS 91894 15 1 2 1063 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Quercus acuta 2 Quercus acutissima 4 Quercus agrifolia 2 Quercus alba 3 51 Quercus aliena 7 Quercus argentata 2 Quercus arizonica 1 Quercus baronii 2 Quercus brantii 2 Quercus buckleyi 1 Quercus cerris 22 Quercus cf. velutina JAG350 8 Quercus chrysolepis 2 Quercus coccifera 22 Quercus coccinea 1 Quercus crenata 17 Quercus dentata 8 Quercus engelmannii 1 Quercus engleriana 1 Quercus falcata 7 Quercus frainetto 24 Quercus fusiformis 1 Quercus gambelii 2 Quercus garryana 5 Quercus gemelliflora 3 Quercus geminata 24 Quercus gilva 3 Quercus glauca 42 Quercus griffithii 4 Quercus hemisphaerica 1 Quercus hondae 2 Quercus ilex 40 Quercus infectoria 3 Quercus ithaburensis 3 Quercus ithaburensis subsp. macrolepis 5 Quercus laeta 1 Quercus lamellosa 2 Quercus libani 2 Quercus lobata 1 Quercus lyrata 3 Quercus macranthera 2 Quercus macrocarpa 43 Quercus marilandica 3 Quercus miyagii 3 Quercus mongolica 4 Quercus mongolica subsp. crispula 3385 1 Quercus mongolica var. grosseserrata 22 Quercus montana 1 Quercus multinervis 4 Quercus mycorrhizal host 2 Quercus myrsinifolia 12 Quercus nigra 85 Quercus oidocarpa 2 Quercus oleoides 66 Quercus palustris 7 Quercus petraea Quercus petraea/Quercus robur mixed clone library 148 Quercus petraea subsp. iberica 3 Quercus phillyraeoides 97 Quercus pseudosemecarpifolia 1 Quercus pubescens 30 Quercus pyrenaica 2 Quercus robur 81671 3 1 2 67 Quercus rubra 59 Quercus rugosa 3 Quercus sadleriana 1 Quercus salicina 3 Quercus serrata 12 Quercus sessilifolia 3 Quercus suber 6690 9 104 Quercus subsericea 3 Quercus tomentella 6 Quercus trojana 9 Quercus turbinella 2 Quercus variabilis 4 Quercus velutina 1 Quercus virginiana 55 Quercus wutaishanica 2 Quercus x morisii 5 RETROPHYLLUM 14 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Retrophyllum comptonii 3 Retrophyllum minus 1 Retrophyllum rospigliosii 8 Retrophyllum vitiense 2 SALIX 420 18 736 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Salix acmophylla 1 Salix alaxensis 7 Salix alba 10 18 Salix alba subsp. vitellina 6 Salix alba x Salix pentandra 4 Salix amygdaloides 2 Salix arctica 1 Salix aurita 3 Salix aurita x Salix caprea 1 Salix aurita x Salix cinerea x Salix myrsinifolia 1 Salix aurita x Salix myrtilloides 3 Salix aurita x Salix repens subsp. repens 2 Salix babylonica 26 Salix bakko 2 6 Salix bebbiana 21 Salix borealis 2 Salix brachypoda 3 Salix caprea 12 Salix caprea subsp. caprea 4 Salix caprea var. sericea 4 Salix caprea x Salix cinerea 1 Salix cardiophylla 10 Salix chaenomeloides 1 Salix chamissonis 30 Salix cheilophila 1 Salix cinerea 3 Salix clathrata 1 Salix cordata 2 Salix daliensis 1 Salix dasyclados 1 Salix discolor 3 6 Salix elaeagnos 15 1 Salix eriocephala 38 Salix exigua 24 Salix exigua var. hindsiana 1 Salix exigua var. sessilifolia 1 Salix fargesii 1 Salix floccosa 1 Salix floridana 2 Salix fragilis 18 8 Salix fuscescens 20 Salix gilgiana 9 73 Salix glauca 1 Salix glauca subsp. glauca 3 Salix glauca subsp. stipulifera 2 Salix glauca var. acutifolia 1 Salix gooddingi 1 Salix gracilior 1 Salix gracilistyla 4 Salix gyirongensis 1 Salix hastata 8 Salix herbacea 4 Salix herbacea x Salix polaris 1 Salix heterochroma 1 Salix hukaoana 2 Salix humboldtiana 1 Salix integra 1 Salix interior 2 Salix kirilowiana 1 Salix laevigata 1 Salix lanata 3 Salix lapponum 4 Salix linearistipularis 1 Salix lucida 10 Salix maccalliana 1 Salix magnifica 2 Salix matsudana 26 3 3 Salix melanopsis 13 Salix miyabeana 24 Salix mucronata 4 Salix myrsinifolia 4 Salix myrsinifolia subsp. kolaensis 3 Salix myrsinifolia x Salix phylicifolia 4 Salix myrsinites 4 Salix myrtilloides 6 Salix myrtilloides x Salix repens subsp. repens 2 Salix neolapponum 1 Salix nigra 8 Salix nummularia 6 Salix ovatomicrophylla 1 Salix paradoxa 1 Salix paraplesia 1 Salix pentandra 10 Salix phlebophylla 2 Salix phylicifolia 3 Salix polaris 24 Salix polyadenia 1 Salix przewalskii 2 Salix pulchra 4 Salix purpurea 13 Salix raddeana 2 Salix recurvigemmis 4 Salix reinii 4 Salix repens 2 Salix repens subsp. arenaria 4 Salix reptans 10 Salix reticulata 25 Salix rosmarinifolia 3 Salix rotundifolia 1 Salix sachalinensis 37 Salix saposhnikovii 1 Salix saxatilis 10 Salix schwerinii 11 Salix sclerophylla 1 Salix sericea 3 Salix siuzevii 3 Salix sphenophylla 10 Salix subfragilis 1 Salix subreniformis 1 Salix taxifolia 2 Salix tetrasperma 1 Salix triandra 13 Salix tschuktschorum 14 Salix viminalis 351 1 10 Salix wolfii 1 Salix x pendulina 2 Salix x rubens 5 SAXEGOTHAEA 26 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Saxegothaea conspicua 26 SCIADOPITYS 11 1 104 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Sciadopitys verticillata 11 1 104 SEQUOIA 5 40 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Sequoia sempervirens 5 40 SEQUOIADENDRON 1 23 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Sequoiadendron giganteum 1 23 SUNDACARPUS 2 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Sundacarpus amarus 2 TAIWANIA 2624 10 213 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Taiwania cryptomerioides 2624 10 208 Taiwania flousiana 5 TAXODIUM 57 82 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Taxodium distichum 57 72 Taxodium mucronatum 10 TAXUS 161 115 373 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Taxus baccata 6 73 Taxus brevifolia 2 36 Taxus canadensis 8 55 Taxus cuspidata 161 21 83 Taxus floridana 2 Taxus globosa 4 13 Taxus sp. hhg-2001 1 Taxus wallichiana 31 28 Taxus x hunnewelliana 2 8 Taxus x media 41 74 TETRACLINIS 11 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Tetraclinis articulata 11 THUJA 23 193 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Thuja koraiensis 2 16 Thuja occidentalis 4 39 Thuja plicata 15 94 Thuja standishii 1 36 Thuja sutchuenensis 1 8 THUJOPSIS 3 59 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Thujopsis dolabrata 3 59 TORREYA 1 73 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Torreya californica 1 31 Torreya fargesii 8 Torreya grandis 13 Torreya jackii 2 Torreya nucifera 16 Torreya taxifolia 3 TSUGA 12 183 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Tsuga canadensis 33 Tsuga caroliniana 3 Tsuga chinensis 21 Tsuga diversifolia 3 Tsuga dumosa 1 48 Tsuga forrestii 12 Tsuga heterophylla 11 43 Tsuga mertensiana 20 WIDDRINGTONIA 1 25 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Widdringtonia cedarbergensis 16 Widdringtonia nodiflora 1 7 Widdringtonia schwarzii 2 WOLLEMIA 24 SPECIES EST cDNA TSA TG Transcr Assembly cMAP ReSeqAmp SNP ExpStudies Protein Gbrowse StockCenter Wollemia nobilis 24