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Welcome to the Dendrome Project!

Icon 05 TreeGenes

Sequence Resources

Summary by Genus

Colleague Directory

Colleagues Organizations

Species Database

Forest Trees

Literature Database

Search Literature

Transcriptome Database

Search Transcriptome Transcriptome Summary

Protein Database

Search Proteins Protein Summary

Expression Studies

Search Expression Expr. Studies Summary

DiversiTree

Genotype, Phenotype and Sequence

Comparative Mapping Database

Published Maps Maps Recently Submitted Search Cmap

GMOD: Genome Browser

GBrowse Portal

Submissions

Submit to TreeGenes

Icon 03 Updates

Douglas-fir and Pinus taeda v1.0 Transcriptomes loaded into GBrowse | Literature pipeline recently updated to integrate sequence data | DiversiTree custom TreeGenes interface expanded to deliver phenotype data |

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Search Protein

Forest tree annotated proteins have been downloaded from the NCBI nr, Swiss-Prot, and TrEMBL databases. Protein sequences have also been formatted for NCBI BLAST searches.

Search parameters
By Species
By Database
By Identifiers Accession ID Example: A4GYS0
Protein Name Example: Acetyl-coenzyme A
Gene Name Example: accD
GenBank Accession ID Example: A4GYS0
GenBank GI Example: 133712039
Pathway Example: Lipid metabolism
By GO GO Type
GO ID
By Non-GO References Reference Type
Reference ID
By Literature Author
Title
Year
Keywords Example: DNA, Poplar
By CMAP feature