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Douglas-fir and Pinus taeda v1.0 Transcriptomes loaded into GBrowse | Literature pipeline recently updated to integrate sequence data | DiversiTree custom TreeGenes interface expanded to deliver phenotype data |

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Search ESTs

The form below has been provided to enable users to search through our comprehensive forest tree EST repository that currently represents species, libraries, and a total of sequences (total ESTs available for each species represented are listed on the summary page). This resource is consistently being updated with records directly submitted as well as those available through NCBI. Follow the links on the results page to obtain more information on the related species, publications, and genetic maps.

The resequencing database features ESTs from conifers that have been involved in high-throughput resequencing studies.

If you would like to submit your EST sequences to TreeGenes, please proceed to our processing pipeline.

Search parameters

By Species --ALL GENUS-- Acacia Araucaria Castanea Chamaecyparis Cryptomeria Cunninghamia Eucalyptus Fagus Larix Picea Pinus Populus Pseudotsuga Quercus Salix Taiwania Taxus --ALL SPECIES-- By NCBI identifiers dbEST ID Example: 14375211 EST Name Example: Q039H10 GenBank Accession ID Example: BU872164 Genbank ID Example: 24063688 By clone Clone ID Example: CC0003 Clone Source By library Library name -- All Libraries -- Cryptomeria japonica male cone LIBEST_011981 Populus wood cDNA library GQ099: Mixed spruce tissues Pco02-Xylem-wounded-Norm (PCO02) LIBEST_026454 SSH2P6 LIBEST_020893 Salix matsudana root WS-SE-N-A-18 Loblolly pine C Loblolly pine NA LIBEST_014662 Populus dormant bud cDNA library Populus euphratica root and shoot LG0AAD Pba02-Xylem-wounded-Norm (PBA02) LIBEST_014191 Poplar cDNA library from young opposite xylem Drought-stressed loblolly pine roots DS1 SS-B-24 AN SS-BD-N-30 NXPV (Nsf Xylem Planings wood Vertical) LIBEST_018223 NUL American Chestnut cDNA stem library ACEST002 LIBEST_023788 Subtractive cDNA library from laminarin-treated poplar sus... Populus euphratica leaf 3-6 months, adult PD_BX library Cryptomeria japonica library (Moriguchi Y) Drought-stressed loblolly pine roots DS3 LIBEST_015607 IS-B-A-7 LIBEST_009591 Populus cambium cDNA library GQ017: Immature somatic EMBRYOS GQ041 - Shoot tip - Dormant (Normalized) LIBEST_026442 SSH1P1 PpCK16h LIBEST_024494 loblolly pine 6d-7d after topkilling library GQ027: Mature Somatic EMBRYOS LIBEST_014656 Populus senescing leaves cDNA library Loblolly pine roots recovering from drought DR3 Root cold PT-X-FL-A-1 LIBEST_016458 PTxD-IL-A-5 LG0ABA LIBEST_026298 Fagus sylvatica leaves eep1c LIBEST_026361 Eucalyptus grandis Mature leaves Poplar xylem Lambda ZAPII library LIBEST_014660 Populus shoot meristem cDNA library LIBEST_007133 Poplar first strand cDNA Eucalyptus globulus cDNA after 12 days contact between symbiotic partner... GQ001: Male strobili developmental sequence LIBEST_024342 American beech multiple tissues GQ002: Female cones developmental sequence LIBEST_027241 SSH-MIC (Pinus pinaster seedling root) Quercus robur library (Oelmueller R) eef1c LIBEST_026230 WZ0APPAA LIBEST_026962 cDNA Library of Larix gmelini under treated with Jasmonic ... GQ020: Clean ROOTS systems -Diurnal cycle Cryptomeria japonica seedling leaves NXSI (Nsf Xylem Side wood Inclined) BAVsControl Cryptomeria japonica supression subtracted cDNA library GQ040 - Shoot tip - Active growth (Normalized) SS-B-N-21 LIBEST_027329 Quercus petraea/Quercus robur mixed clone library root ape... AS LIBEST_014658 Populus active cambium cDNA library Black spruce 6 week old Salt Stress Responsive Gene Library Populus deltoides young leaf LIBEST_026233 WZOAQRAK Populus euphratica cambium 3-6 months Taiwania developing stem tissue cDNA library GQ008: Cambium, phloem and bark of girdled saplings LP-B-Oc-1 LIBEST_020897 Salix elaeagnos roots LIBEST_016449 PT-DX-A-7 LIBEST_020896 Salix alba leaves LIBEST_026237 WZ0APPAE LIBEST_022395 LG0ADM Cryptomeria japonica pollen Well-watered loblolly pine roots WW2 Pinus pinaster root seedling Shoot tip pitch canker susceptible Pba01-Bark-wounded-Norm (PBA01) LIBEST_011167 Poplar developing cambium Norway spruce mRNA Roots plus added boron LIBEST_026643 WZ0AQRAS Pinus pinaster Corsican differentiating xylem LIBEST_026263 leaf of Populus simonii x Populus nigra Differentially exp... WS-MC-N-A-20 American Chestnut subtracted cDNA stem library ACEST001 LIBEST_026755 Young leaves infected by Puccinia psidii LIBEST_005646 Pinus elliottii cDNA library LIBEST_020895 Salix matsudana leaves LIBEST_026446 SSH1P4 LIBEST_023546 SSH library of pathogen infected Fagus sylvatica roots 2 K00008 eer1c LIBEST_024855 Acacia hybrid EST Library LIBEST_009533 Populus strain T89 leaves LIBEST_016463 PTxN-IB-N-A-11 NXLV (Nsf Xylem Late wood Vertical) LIBEST_016452 PT-MB-A-13 LIBEST_017764 Fagus sylvatica ozone regulated SSH library Oak tissue culture growing 1 hour in hypertonic medium LIBEST_024310 Differentially expressed genes during needle maturation Nsf Xylem Compression wood Inclined LIBEST_026506 Cork oak library of phellem Root gravitropism October 2003 test GQ013: Elongating ROOTS tips - saplings LIBEST_022776 Radiata pine juvenile latewood cDNA library LIBEST_011978 Populus imbibed seed cDNA library Root flooded CMRMEb GQ035 - Needles - End of season elicitor-induced cDNA library RS SS-NE-28 LIBEST_026452 SSH2P4 WS-ES-A-1 Sitka spruce drill-wounded bark GQ007: Secondary xylem of girdled saplings LIBEST_014171 Hybrid aspen bark up-regulated LIBEST_016459 PTxD-IL-FL-A-4 LIBEST_026232 WZOAQRAI LIBEST_023545 SSH library of pathogen infected Fagus sylvatica roots 1 LIBEST_026606 WZOAFSAA SS-R-N-A-11 PT-MB-A-13 Populus male catkins cDNA library 5D_DOWN Nsf Xylem Normal wood Vertical GQ033 - Terminal leader (Normalized library) SS-IL-A-FL-14 Eucalyptus globulus cDNA after four days contact between symbiotic partn... eec1c leaf inoculated with Marssonia pathogen of Populus euramericana LIBEST_022635 LG0ABA Eucalyptus globulus under low temperature Eucalyptus globulus C14 clone shoot apex under hydric stress K00004 LIBEST_026451 SSH2P3 Douglas-fir maximum cold hardiness cDNA library 2003-2004 (MH_2003-04) Taiwania seedling cDNA library Eucalyptus globulus differentiating xylem RAIZ clone VC9 GQ025: Annual flush SHOOTS diurnal cycle- trees Populus alba leaf 2 year old plant GQ026: NEEDLES - N fertilization treatments Sequencing ESTs from loblolly pine embryos LIBEST_026445 SSH2P2 Chitosan treated slash pine cell cultures 6H_UP SS-B-23 LIBEST_024789 light-regulated genes in Walnut leaves Pinus pinaster developing buds collected on several trees adult trees Roots plus added mercury LIBEST_014192 Poplar cDNA library from young tension xylem LIBEST_020890 PCR amplification from Populus tremula x Populus alba cDNA LIBEST_001438 Hybrid aspen plasmid library Japanese larch somatic embryogenesis SSH library Salicylate-treated slash pine seedlings LIBEST_020485 Populus hybrid H11-11 up-regulated in response to auxin Stem Response Resistant Pinus radiata post meiotic male cone LIBEST_011977 Populus apical shoot cDNA library SS-BD-32 Root control Jack Pine pre-germination Salt Stress Responsive Gene Library 18H_DOWN LIBEST_016460 PTxD-IL-N-A-9 LG0AAA LIBEST_015976 Eucalyptus globulus subsp. globulus 8 day old seedlings Normalized pine embryo library, Lib_D GQ032 - Shoot tip (Normalized library) cDNA library from pre-meiotic male cones LIBEST_020899 Salix elaeagnos leaves LIBEST_026417 WZOAFSCA LIBEST_015631 GQ012 LIBEST_027208 Larix kaempferi somatic embryogenesis SSH library LIBEST_015632 GQ015 LIBEST_015608 IS-B-N-A-10 CMSMEb LIBEST_017590 SS-IB-A-FL-15 American beech multiple tissues Roots minus iron LIBEST_026165 WS-CBM-34 Taxus cuspidata cDNA GQ006: Cambium and phloem from mature trees 18H_UP LIBEST_016455 PT-X-FL-A-1 LIBEST_027427 Differentially expressed TDF library of Populus hopeiensis... PT-DX-N-A-10 K00002 Pinus pinaster induced compression wood LIBEST_016568 Pta bottom Populus flower cDNA library GQ037 - Shoot tip - Dormant Nsf Xylem Planings wood Vertical Populus euphratica hydrotropism differential display LIBEST_026358 Eucalyptus grandis Xylem (XY) vascular tissue LIBEST_027588 Xylem vascular tissue, differentiating LIBEST_011055 Heterobasidion annosum - Scots pine infection stage (HAGE)... Loblolly pine N eej1c LIBEST_011982 Populus bark cDNA library Roots minus nitrogen Pitch canker resistant slash pine challenged with F. circinatum LIBEST_012617 Poplar SC cDNA library Root at 37 C for 24 hr Populus simonii Carr LIBEST_022060 Gnetum gnemon leaf (NYBG) Populus stem seasonal library Pinus pinaster differentiating xylem libraries 3, 4, 13, 14 LIBEST_026444 SSH1P3 LIBEST_017174 Eucalyptus woody tissue TDF collection Radiata pine mature earlywood cDNA library LIBEST_025153 Pinus pinaster differentiating xylem libraries 3, 4, 13, 1... Loblolly pine roots recovering from drought DR2 LIBEST_026185 Acacia mangium developing secondary xylem and shoot normal... LIBEST_026449 SSH1P7 Oak tissue culture growing 2 days in hypertonic medium Quercus robur SSH3 LIBEST_026221 WZ0APPAB differential display sequences Loblolly pine roots recovering from drought DR1 Well-watered loblolly pine roots WW1 LIBEST_012514 Gnetum leaves (NYBG) Cryptomeria japonica male strobilus Roots plus added aluminum Pinus pinaster library France GQ019: Clean ROOTS systems - P treatments SS-S-25 Chamaecyparis obtusa Fluorescent differential display amplification prod... LIBEST_016822 Populus tremula X Populus alba developing vegetative bud c... LIBEST_014190 Poplar cDNA library from wood tissues Cryptomeria japonica xylem (sapwood-heartwood transition zone) GQ039 - Stem - Dormant WS-SE-A-16 LIBEST_009772 loblolly pine bent shoot tip LIBEST_026019 cDNA library from NaCl treated poplar cells LIBEST_027577 Male strobilus SSH-cDNA Library (early stage) Larix kaempferi xylem WS-X-A-3 NXCI (Nsf Xylem Compression wood Inclined) Root gravitropism April 2003 test CMFMEc LG0AAB Pinus radiata male cone library PT-DX-A-7 BB - Norway Spruce Subtracted Library (Adaptability-warm) Pine Lambda Zap Xylem library LIBEST_026818 Sciadopitys verticillata seedling cDNA library LIBEST_026693 Mature leaves (EUGR-ML) LIBEST_026645 WZ0AQRAN LIBEST_026030 SSH Quercus robur one year old cuttings LIBEST_011983 Populus tremula cambium cDNA library AA - Norway Spruce Subtracted Library (Adaptability-cold) LIBEST_027578 Male strobilus SSH-cDNA Library (tetrad stage) LIBEST_026752 Seedlings (EUGR-SE) LIBEST_014664 Populus infected leaf substracted cDNA library LIBEST_012623 Salix viminalis leaf Lambda TriplEx library Drought-stressed loblolly pine roots DS2 Pinus pinaster xylem CMRMEa LIBEST_016396 Seed coat from mid-season walnut embryos collected Aug 1 LIBEST_024493 shortleaf pine 24h-48h after topkilling library GQ034 - Needles - Mid-season LIBEST_017591 SS-IL-A-FL-14 LIBEST_026224 WZOAQRAQ LIBEST_009813 Poplar developing reaction wood first strand cDNA LIBEST_016456 PTxD-ICC-A-12 WS-PP-N-A-12 Late subtracted library LIBEST_023365 Quercus mongolica var. crispula inner bark cDNA library CMFMEb Pco01-Bark-Wounded-Norm (PCO01) LIBEST_026857 Quercus robur cDNA-AFLP LIBEST_026450 SSH2P1 PT-P-FL-A-2 LIBEST_026978 Pinus radiata stem 1 year old seedling stems Pinus sylvestris cotyledons SS-NE-27 LIBEST_019638 wound or herbivory regulated poplar library GQ003: Vegetative buds developmental sequence Roots minus sulfur LIBEST_016462 PTxN-IB-A-6 GQ030 - Xylem planings - daytime and seasonal Black Spruce pre-germination Salt Stress Responsive Gene Library Roots plus added iron Roots minus potassium Pinus pinaster differentiating xylem adult LIBEST_016461 PTxD-NR-A-8 LIBEST_024227 Hybrid poplar cambium cDNA library during tension wood for... Populus cDNA, trichocarpa shoot library LIBEST_027037 cDNA library of Pinus pinaster inoculated with pine wood n... LIBEST_020380 Cork oak SSH library of phellem Chamaecyparis formosensis developing tissue cDNA library Fusarium circinatum induced cDNA library from Pinus patula Eucalyptus gunnii xylem versus phloem SSH library WS-CRD-33 NXRV (Nsf Xylem Root wood Vertical) Quercus robur SSH6 WS-X-N-A-9 LIBEST_021736 nine-year-old eucalypt xylem library LIBEST_014169 Hybrid aspen xylem up-regulated LIBEST_026222 WZOAQRAR Mechanically wounded slash pine seedlings PtIFG1 LIBEST_026166 Pba01-Bark-wounded-Norm (PBA01) Quercus robur SSH5 GQ016: Primary, secondary SHOOT -N fertil. Treatments Radiata pine transition earlywood cDNA library Cryptomeria japonica developing female cone LIBEST_022778 Radiata pine mature latewood cDNA library LIBEST_014655 Populus tension wood cDNA library LIBEST_022775 Radiata pine juvenile earlywood cDNA library Pinus pinaster differenciating xylem adult LIBEST_015629 GQ010 5D_UP LIBEST_024710 The subtractive cDNA library of T. cryptomerioides Cryptomeria japonica inner bark Pine TriplEx shoot tip library Eucalyptus gunnii differentiating xylem LIBEST_027328 Quercus robur root apex 1 year old cuttings Cryptomeria japonica cambium and surrounding tissues CMLMEa LIBEST_016569 Pta top LIBEST_026264 stem of Populus simonii x Populus nigra Differentially exp... LIBEST_016450 PT-DX-N-A-10 Radiata pine juvenile earlywood cDNA library Eucalypt cambium-minus-leaf subtracted cDNAs LIBEST_025307 Fagus crenata inner bark SS-BD-29 Populus euphratica shoot 3-6 months LIBEST_027579 Male strobilus SSH-cDNA Library (mature stage) LIBEST_025310 Fagus crenata inner bark cDNA library ABAVsCABA LIBEST_026370 Pinus sylvestris roots untreated control K00001 LIBEST_026754 Xylem (EUGR-XY) LIBEST_015628 GQ009 Douglas-fir (Pm_1000) cDNA library Eucalyptus globulus cDNA after 21 days contact between symbiotic partner... Quercus robur root Needles control 2 LIBEST_026360 Eucalyptus grandis Whole seedlings (treated) LIBEST_026753 Treated seedlings (EUGR-TS) GQ029 - Xylem scrapings - AT NITE LIBEST_026447 SSH1P5 LIBEST_011980 Populus petioles cDNA library LIBEST_026376 Pinus pinaster root (Avila) LIBEST_020894 Salix fragilis roots WS-PS-N-A-8 Roots minus micronutrients LIBEST_016451 PT-GT-FL-A-3 LIBEST_027587 Xylem vascular tissue, differentiating GQ022: ROOT XYLEM - mature trees Roots minus calcium LIBEST_016457 PTxD-ICC-N-A-14 LIBEST_011971 Poplar limiting vs. luxuriant nitrogen LIBEST_014657 Populus dormant cambium cDNA library Populus euphratica shoot in vitro plantlet Israel GQ004: Non-lignified secondary xylem from mature trees LIBEST_011979 Populus root cDNA library loblolly pine bent shoot tip LIBEST_027207 Larix kaempferi root SSH Library LIBEST_026129 Populus simonii x Populus nigra Differentially expressed T... LIBEST_015911 IS-B-A-4 Pinus pinaster aerial part seedling Chamaecyparis obtusa cambium and surrounding tissues LIBEST_012726 Tulare pellicle library Non-normalized library of 1 month old bare root LIBEST_014659 Populus cold stressed leaves cDNA library SS-BD-31 Eucalyptus globulus microgravity versus gravity subtracted library Chinese fir differentiating xylem specifically expressed cDNA library Radiata pine juvenile latewood cDNA library Roots, dark LIBEST_017589 SS-IB-A-FL-13 LG0ACA LIBEST_024308 cDNA library from mannitol treated poplar cells SS-NE-A-26 Pinus pinaster differentiating xylem Chamaecyparis formosensis inner bark tissue cDNA library CMLMEb LIBEST_026227 WZOAQRAP GQ028 - Cambium / phloem scrappings (Normalized library ) Pinus pinaster Corsican differentiating xylem adult LIBEST_026097 Ammonium Responsive Genes CC - Norway Spruce Subtracted Library (bud set - short day) GQ038 - Stem - Active growth Acacia mangium flower subtracted cDNA library WS-SE-N-A-19 Pinus radiata somatic embryogenic library Populus euphratica early salt-stressed Library LIBEST_022396 LG0ADN LIBEST_002778 Poplar bark first strand cDNA LIBEST_015558 hybrid poplar systemically wound-induced leaf cDNA library Radiata pine mature latewood cDNA library Well-watered loblolly pine roots WW3 DD - Norway Spruce Subtracted Library (bud set - long day) Loblolly pine CA Subtracted pine embryo library, Lib_C 6H_DOWN LIBEST_026359 Eucalyptus grandis Whole seedlings (untreated) Cryptomeria japonica vegetative bud eea1c K00006 WS-PS-A-2 LIBEST_017477 Fagus sylvatica leaf Early Somatic embryo cDNA-AFLP LIBEST_014188 Poplar cDNA library from mature xylem Eucalyptus globulus C14 clone root apex under water stress Cryptomeria japonica needle LIBEST_002503 Populus alba x Populus tremula bark Populus euphratica root 3-6 months LIBEST_026234 WZ0APPAC Cryptomeria japonica pollen (Ujino-Ihara,T.) LIBEST_012437 Eucalyptus globulus cDNA after 12 days contact between sym... Needles control LIBEST_009590 Populus leaf cDNA library Quercus robur SSH1 Jack pine 7 month old Salt Stress Responsive Gene Library Populus euphratica leaf 3-6 months Roots plus added NaCl CMSMEa GQ031 - Xylem Scrapings (Normalized library) LIBEST_026448 SSH1P6 WS-MC-A-17 Subtracted pine embryo library, Lib_B LIBEST_027038 cDNA library of Pinus pinea inoculated with pine wood nema... Roots plus added copper LIBEST_020898 Salix alba roots LIBEST_026453 SSH2P5 LIBEST_015630 GQ011 PtIFG2 Nsf Xylem Late wood Vertical LIBEST_026369 Pinus sylvestris Suillus bovinus treated roots LIBEST_026231 WZOAQRAM LIBEST_016454 PT-P-FL-A-2 LIBEST_020486 Populus hybrid H11-11 down-regulated in response to auxin LIBEST_009703 Heterobasidion annosum - Scots pine infection stage subtra... GQ013 - Elongating ROOTS tips - sapplings Healthy pine stem suppression subtraction hybridization library Root control 2 (late) Taiwania inner bark cDNA library Pine TriplEx pollen cone library Pinus elliottii cDNA library Roots treated with paraquat WS-PP-A-6 Pine Lambda Zap Express seedling roots Library nine-year-old eucalypt xylem library LIBEST_022780 Radiata pine transition latewood cDNA library Eucalyptus gunnii differentiating xylem AFOCEL clone 832 LIBEST_014606 Populus tomentiglandulosa T. Lee cDNA library PT-MB-N-A-15 PT-GT-FL-A-3 Roots minus magnesium Differentiating xylem LIBEST_016453 PT-MB-N-A-15 Pinus pinaster needles seedling LIBEST_022777 Radiata pine mature earlywood cDNA library LIBEST_022779 Radiata pine transition earlywood cDNA library Eucalyptus globulus juvenile and mature wood SSH library LIBEST_027562 Xylem vascular tissue, differentiating LIBEST_012518 Gnetum female cone (NYBG) LIBEST_026164 WS-CRD-33 LIBEST_026443 SSH1P2 LIBEST_012436 Eucalyptus globulus cDNA after four days contact between s... RN SS-IB-A-FL-15 LIBEST_026741 Picea abies cDNA-AFLP full-sib Roots minus phosphorous LIBEST_014189 Poplar cDNA library from cambial zone Radiata pine transition latewood cDNA library Nsf Xylem Root wood Vertical American Chestnut cDNA stem library LIBEST_012439 Eucalyptus globulus cDNA after 21 days contact between sym... LIBEST_014170 Hybrid aspen various expression patterns Ammonium Responsive Genes Populus euphratica shoot in vitro plantlet China Populus euphratica leaf adult LIBEST_026235 WZ0APPAD leaf inoculated with Marssonia pathogen of Populus deltoides SS-IB-A-FL-13 LIBEST_026301 Embryogenic cell culture LIBEST_026651 WZ0AQSAA GQ018: Clean ROOTS systems - N treatments K00007 K00003 GQ036 - Shoot tip - Active growth Eucalyptus globulus gravity versus microgravity subtracted library SS-B-N-22 Differentially expressed genes during needle maturation SS-R-A-5 Populus female catkins cDNA library CMFMEa Cultivar Tissue type -- All Tissue Types -- A pool of different stem tissues- cambial zone harvested on the bark sid... Active cambium Actively growing shoot tips, approximately 3 mm in length with developin... Apex Bark Bark (phloem and cambium attached) from leader and internodes of a mecha... Bark (phloem and cambium attached) with O. clavigerum inoculation treatm... Bark (secondary phoem, cortex, and primary periderm) not wounded, wounde... Bark (with phloem and cambium attached) Bud Cambial Cambial region Cambium Cambium and phloem region from normal vertical trees Cold-stressed leaves Cones from mature trees harvested at Vernon, British Columbia on May 16t... Cortical resin ducts Cotyledon Developing xylem Differentiating Xylem Differentiating xylem Differentiating xylem from roots 1 cm in diameter or larger Dormant buds Dormant cambium Dormant shoot tips dissected from buds Early season phloem harvested June 15th, mid season phloem harvested Jul... Early season xylem harvested June 15th, mid season xylem harvested July ... Embryogenic Tissue and surrounding calli Embryogenic tissue Entire cone Entire strobilus Female catkins Flushing buds harvested May 16th, young shoots harvested June 15th and m... Flushing buds harvested May 16th, young shoots harvested June 15th, and ... Heterobasidion parviporum inoculated spruce bark Inner bark Leader bark (phloem and cambium attached) induced with Pissodes strobi (... Leader bark (phloem and cambium attached) treated with methyl jasmonate Leader bark (phloem and cambium attached) with wounding treatment Leaf Leaves Male catkins Male cones Needle Needles Needles and primary shoot Needles from plant fertilized with 0 mM NH4NO3 (low N) AND with 10 mM NH... Non-lignified differentiating secondary xylem from normal vertical trees Non-lignified differentiating secondary xylem from normal vertical trees... Partly-lignified differentiating secondary xylem from normal vertical tr... Periderm Phellem Pith, xylem, cambium, phloem and bark Previous year's bark (phloem and cambium attached) from mechanically wou... Previous year's xylem from mechanically wounded trees Primary xylem and primary phloem from whole stems Secondary stem comprising secondary xylem, secondary phloem, cambial reg... Secondary xylem tissues of trees girdled by removing a ring of bark ca. ... Senescing leaves Shoot Shoot meristem Shoot tip collected from terminal leader and from branches with needles ... Shoot tips and secondary stems of trees approximately 80 cm tall Shoot tips of trees approximately 80-120 cm tall Somatic embryo tissue Stem Suspension Culture Somatic Embryos (Stages 1-3) Suspension cell Tender roots tips free of michorizee Tension wood Terminal leader, without neeldes, terminal bud and sub-terminal buds. St... Tissue culture growing 1 hour in hypertonic medium Tissue culture growing 2 days in hypertonic medium Various tissues Vascular cambium, secondary phloem and bark of trees girdled by removing... Vascular tissues Virus/Fungal infected leaf Whole embryo Whole embryos excised from megagametophytes Whole roots systems, predominantly free of michorizee Whole stems with secondary growth, composed of secondary xylem, secondar... Xylem Xylem from leader and internodes of a mechanically wounded tree Xylem, pith, cambium, phloem, bark Young differentiating xylem from opposite wood side harvested on one-yea... Young differentiating xylem from tension wood side harvested on one-year... Young differentiating xylem harvested on opposite wood side of tilted tr... Young differentiating xylem harvested on the tension wood side of tilted... Young root growth (terminal 1-3 cm) and old root growth (distal to termi... Young root growth (terminal 1-3 cm) and old root growth (distal to termi... Young shoots Young, developing xylem aerial part apical bud apical shoot bare root bark bud cambial zone harvested on the bark side cambium cambium and surrounding tissues carpels compression wood cotyledons developing buds collected on several trees developing female cone developing stem tissue of seedling developing tissue of seedling differenciating xylem differentiating xylem embryogenic tissue entire seedling floral buds flower flowers green leaves imbibed seed inner bark inner bark tissue leaf leaf and flower leave leaves leaves, stems, roots lignin-forming tissue culture male cone male strobilus mature xylem harvested on opposite and tension wood stem mature xylem, immature xylem, phloem, cork mesophyll mixture of developing secondary xylem and shoot needle needle tissue needles needles and some stems needles, stems, and buds needles, stems, and roots petioles phellem pollen pooled sample from multiple tissues primary xylem root root and shoot root apex root cap roots roots, stems and leaves seedling leaves setting buds shoot shoot apex shoot tips, mature leaves, and woody stems shoots stem stem reaction wood swelling buds vegetative vegetative bud white root white roots whole green part of seedlings wood xylem xylem (sapwood-heartwood transition zone) xylem fraction young leaf Cell type By literature Author -- All Authors -- Aikawa, Takuya Alonso, Pablo Amini, Bahram Andersson, A A Aspeborg, Henrik Aspeborg, H H Bhalerao, R R Bhalerao, Rupali R. Blomqvist, K K Boerjan, Wout A. Bohlmann, Jörg Bourquin, Veronica Brinker, Monika Canovas, Francisco M. Canton, Francisco R. Centeno, Maria Luz Clapham, David H. Constabel, C. Peter Cortizo, Millan Coutinho, Pedro M. Craig, Deborah L. David, Alain David, Helene Denman, Stuart E. Derory, Jeremy Djerbi, Soraya Domon, Jean Marc Dudits, Denes Dumas, Bernard Duplessis, Sebastien Encelot, Nathalie Erlandsson, R R Fernandez, Belen Figueras, Merce Fluch, Silvia Fonseca, Sandra Foucart, Camille C Futamura, Norihiro Garcia, Virginie Glössl, Josef J Grima-pattenati, Jacqueline Gu, Rui-sheng Gustafsson, Petter Hackler, Laszlo, Jr. Han, Kyung-hwan Hauser, Marie-Theres MT Henrissat, Bernard Hertzberg, Magnus Hertzberg, M M Holmberg, Anders Huguet, Gemma Igasaki, Tomohiro Jones, John T. Kallas, Asa M. Karlsson, Jan Kikuchi, Taisei Ko, Jae-heung Kosaka, Hajime Kremer, Antoine Ladouce, Nathalie Laine, Eric Larsson, Magnus Léger, Patrick P Liu, Wenbin Liu, Yan-Qun YQ Li, Xi-Sheng XS Li, Yu-Ping YP Lonneborg, Anders Lu, Cheng C Lundberg, Joakim Lundeberg, J J Luschnig, Christian C Madilao, Lufiani L LL Major, Ian T. Martin, Francis Master, Emma R. Ma, Zhen-yi Mellerowicz, Ewa J. Meyer, Yves Miller, Barbara Molinas, Marisa Nagasaka, Kazutoshi Nanjo, Tokihiko Nilsson, Peter Nilsson, P P Nishiguchi, Mitsuru Ogura, Nobuo Olsson, Olof Ordas, Ricardo J. Pais, Maria S. Paux, Etienne Plomion, Christophe Prassinos, Constantinos Pritchard, Leighton Puskas, Laszlo G. Ralph, Steven Gregory SG Regan, Sharon Rodriguez, Ana Rohde, Antje Salin, Franck San-Clemente, Hélène H Sandberg, Goran Schaeffer, Jacques J Schrader, James A. Schrader, Jarmo Sederoff, Ronald Serra, Olga Sharma, Praveen Shinohara, Kenji Shinozaki, Kazuo Sivadon, Pierre Soler, Marcal Stam, Mark Sterky, Fredrik Sundberg, B B Sundberg, Bjorn Taguchi, Yuriko Teeri, T T Teeri, Tuula T. Tsumura, Yoshihiko Tuominen, Hannele Ueno, Saneyoshi Ugawa, Yoshihiro Uhlen, Mathias Uhlén, M M Ujino-ihara, Tokuko Van Montagu, Marc C. Van Zyl, Leonel M. Villarroel, Raimundo Voiblet, Catherine Von Arnold, Sara Wang, Huan H Wang, Yan-Dong YD Wei, Zhao-Jun ZJ Xiang, Zhong-Huai ZH Xia, Run-Xi RX Yang, Jaemo Yoshimaru, Hiroshi Yoshimura, Kensuke Yuan, Ying-jin Zvara, Agnes Title -- All Titles (select author for specific title)-- Year -- All Years -- 2012 2011 2010 2009 2008 2007 2006 2005 2004 2003 2002 2001 2000 1999 1998 1997 1996 1995 1994 1993 1992 1991 1990 1989 1988 1987 1986 1985 1984 1983 1982 1981 1980 1979 1978 1977 1976 1975 1974 1973 1972 1971 1970 1969 1968 1967 1966 1965 1964 1963 1962 1961 1960 1959 1958 1957 1956 1955 1954 1953 1952 1951 1950 1949 1948 1947 1946 1945 1944 1943 1942 1941 1940 1939 1938 1937 1936 1935 1934 1933 1932 1931 1930 1929 1928 1927 1926 1925 1924 Keywords Example: DNA, Poplar By CMAP feature -- All Features -- estAW191301_Eugl estAW191310_Eugl estAW191314_Eugl estAW191319_Eugl estAW191329_Eugl estAW191330_Eugl estAW191331_Eugl estAW191334_Eugl estAW191340_Eugl estAW191343_Eugl estAW191344_Eugl estAW191345_Eugl estAW191346_Eugl estAW191348_Eugl estAW191351_Eugl estAW191353_Eugl estAW191358_Eugl estAW191360_Eugl estAW191364_Eugl estAW191365_Eugl estAW191370_Eugl estAW191371_Eugl estAW191376_Eugl estAW191377_Eugl estAW191378_Eugl