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| Submitted and/or in press |
| Morse A.M., Covert S.F., Nelson C.D., Hunt K.D., Smith K.E., Davis J.M. (2006). Pine Genes Regulated by the Biotrophic Pathogen Cronartium quercuum f sp fusiforme. (in preparation). |
| 2006 |
| Dean J.F.D. (2006). Genomics resources for conifers. Landscapes, Genomics and Transgenic Conifer Forests (editor C Williams). Kluwer-Springer Press. 55-74. |
| 2005 |
| Lorenz W.W., Sun F., Liang C., Zhao X., Kolychev D., Wang H., Cordonnier-Pratt M.M., Pratt L.H., Dean J.F.D. (2005). Water stress-responsive genes in loblolly pine (Pinus taeda L) roots identified by analyses of expressed sequence tag libraries. Tree Physiol. 26:1-16. |
| 2004 |
| Morse A.M., Nelson C.D., Covert S.F., Holliday A.G., Smith K.E., Davis J.M. (2004). Pine genes regulated by the necrotrophic pathogen Fusarium circinatum. Theor Appl Genet. 109:922-32. Abstract |
| Peter G., Neale D.B. (2004). Molecular basis for the evolution of xylem lignification. Curr Opin Plant Biol. 7:737-42. Abstract |
| Neale D.B., Savolainen O. (2004). Association genetics of complex traits in conifers. Trends Plant Sci. 9:325-30. Abstract |
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| Symposia presentations of ADEPT data |
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| 2005 |
| Dean J.F.D. (2005). Using functional genomics to dissect drought responses in pine. Biennial Meeting of the IUFRO Unit on Molecular Biology of Forest Trees: Pretoria, South Africa. November 7-11. |
| Dean J.F.D. (2005). Identification of drought response genes in loblolly pine (Pinus taeda L) by analysis of expressed sequence tag libraries. XIIIth Plant and Animal Genomes Conference, Forest Tree Genomics Workshop: San Diego, CA. January 15-19. |
| 2004 |
| Brown G.R., Gill G.P., Kuntz R.J., Beal J.A., Nelson D., Wheeler N.C., Penttila B., Roers J., Neale D.B. (2004). Associations of candidate gene single nucleotide polymorphisms with wood property phenotypes in loblolly pine. Plant and Animal Genomes XII Conference: San Diego, CA. January 10-14. Abstract |
| Dean J.F.D., Lorenz W.W., Pratt L.H., Cordonnier-Pratt M.M. (2004). Loblolly pine root ESTs and their use for understanding gene responses to environmental stress. Plant and Animal Genomes XII Conference: San Diego, CA. January 10-14. |
| Dean J.F.D. (2004). Understanding plant responses through transcriptional profiling: Knowledge discovery in genomic databases: A PASI on Data Mining Applications for Genomics and Bioinformatics. A Pan-American Advanced Studies Institute (PASI) workshop on bioinformatics: Montevideo, Uruguay. February 9-20. |
| Ersoz E.S., Gonzalez-Martinez S., Gill G., Brown G., Morse A., Davis J., White T., Neale D.B. (2004). SNP Discovery in candidate genes for disease resistance (pitch canker and fusiform rust) and drought tolerance in loblolly pine. Plant & Animal Genomes XII Conference: San Diego, CA. January 10-14. Abstract |
| González-Martínez S.C., Brown G.R., Ersoz E.S., Gill G.P., Kuntz R.J., Beal J.A., Wheeler N.C., Neale D.B. (2004). Nucleotide diversity, linkage disequilibrium and adaptive variation in natural populations of loblolly pine. Plant & Animal Genomes XII Conference: San Diego, CA. January 10-14. Abstract |
| 2003 |
| Brown G.R, Gill G.P., Wheeler N.C., Sederoff R.R., Neale D.B. (2003). Nucleotide diversity in loblolly pine (Pinus taeda L). Plant, Animal and Microbe XI: San Diego, CA. January 11-15. Abstract |
| Dean J.F.D., Cordonnier-Pratt M.M., Covert S.F., Merkle S.M., Pratt L.H., Gingle A.R., Lorenz W.W., Nairn C.J., Will R. (2003). Transcriptome responses to environmental conditions in loblolly pine roots. Plant and Animal Genomes XI Conference: San Diego, CA. January 11-15. |
| Dean J.F.D., Lorenz W.W., Pratt L.H., Cordonnier-Pratt M.M. (2003). The response of loblolly pine root ESTs to water stress. Biennial Meeting of the IUFRO Unit on Molecular Biology of Forest Trees: Umeĺ, Sweden. June 7-12. |
| Dean J.F.D., Lorenz W.W., Pratt L.H., Cordonnier-Pratt M.M. (2003). The response of loblolly pine root ESTs to water stress. 7th International Congress of Plant Molecular Biology: Barcelona. June 23-28. S05-109. |
| Gill G.P., Brown G.R., Neale D.B. (2003). Detection of the sequence mutation responsible for a null allele of cinnamyl alcohol dehydrogenase in loblolly pine. Plant, Animal and Microbe XI: San Diego, CA. January 11-15. Abstract |
| 2002 |
| Dean J.F.D., Cordonnier-Pratt M.M., Covert S.F., Merkle S.M., Pratt L.H., Gingle A.R., Lorenz W.W., Nairn C.J. and Will R. (2002). Transcriptome responses to environmental conditions in loblolly pine roots. NSF Plant Genome Awardees Meeting: Arlington, VA. September 26-27. |
| Gill G.P., Brown G.R., Wheeler N.C., Neale D.B. (2002). Single nucleotide polymorphisms at candidate gene loci for wood quality traits in loblolly pine (Pinus taeda L). Plant, Animal and Microbe X: San Diego, CA. January 12-16. Abstract |
| Neale D.B., White T.L., Davis J.M., Martin T.A., Dean J.F., Covert S.F., Pratt L.F., Cordonnier-Pratt M.M. (2002). Allele discovery for genes controlling economic traits in loblolly pine. Plant, Animal and Microbe X: San Diego, CA. January 12-16. Abstract |
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| Invited Lectures where ADEPT data was presented |
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| 2004 |
| Dean J. (2004). Functional Genomic Tools for Probing Loblolly Pine Responses to the Environment. Department of Biochemistry and Molecular Biology, University of Georgia. April 23. |
| Dean J. (2004). Using Functional Genomics to Understand Tree Biology in Real-Time. Department of Plant Biology, University of Georgia. April 26. |
| Dean J. (2004). Will Genomics and Biotechnology Impact Forestry Practices in Your Lifetime?. University of Maine, Forestry Program Centennial Lecture. April 29. |
| Neale D.B. (2004). Association Genetics of Complex Traits in Loblolly Pine. Warnell School of Forest Resources, University of Georgia. January 27. |
| Neale D.B. (2004). Association studies with molecular markers. Breeding with Molecular Markers: UC Davis Extension Workshop. February 10-11. |
| Neale D.B. (2004). Association genetics of complex traits in loblolly pine. Linking Genomics to Crop Improvement: Texas A&M University. March 31. |
| Neale D.B. (2004). Association genetics of complex traits in forest trees. Environmental Science Policy and Management Dept and Plant and Microbial Biology Dept, University of California at Berkeley. April 8. |
| Neale D.B. (2004). Discovery of genes controlling adaptive traits in Douglas-fir. Agenda 2020 Meeting: Boise, ID. April 27-28. |
| Neale D.B. (2004). Association genetics of complex traits in conifers. Genetics Graduate Group, University of California at Davis. May 24. |
| Neale D.B. (2004). Genomics to breeding in loblolly pine. IEG-40 Meeting, Advancing regeneration Technologies for the Deployment of Elite Southern Pine Germplasm, Jekyll Island, Georgia. June 22-24. |
| Neale D.B. (2004). Association genetics of complex traits in forest trees. Seminar at the Department of Biotechnology, Cornell University. June 28. |
| Neale D.B. (2004). Genomic approaches to understanding quantitative inheritance of disease resistance in forest trees. Annual Meeting of The American Phytopathological Society: Anaheim, CA. July 31-August 4. |
| Neale D.B. (2004). Association genetics of complex economic and adaptive traits in forest trees. Functional Genomics of Environmental Adaptation in Populus of 12th New Phytologist Symposium: Gatlinburg, TN. October 10-13. |
| Neale D.B. (2004). Genomics to breeding in loblolly pine. IUFRO Forest Genetics and Tree Breeding in the Age of Genomics: Charleston, SC. November 1-5. |
| Neale D.B. (2004). Genomics to conservation in forest trees. IUFRO Forest Genetics and Tree Breeding in the Age of Genomics: Charleston, SC. November 1-5. |
| 2002 |
| Covert S. (2002). Fusiform Rust: An analysis of host, pathogen, and environmental interactions. University of Georgia Plant Center Retreat, Swiss Federal Institute of Technology (Zurich, Switzerland), Departments of Genetics, Cellular Biology and Plant Pathology in University of Georgia, Department of Plant Pathology in Pennsylvania State University. |
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