ADEPT2 Meeting Abstracts

2010
Stambolia-Kovach A., Wegrzyn J.L., Parra G., Holt C., Hartigan J., Nicolet C.M., Bruening G.E., Troggio M., Loopstra C., Yandell M., Korf I., Langley C.H., Neale D.B. 2010. Whole Genome Shotgun And BAC Sequences In Loblolly Pine (Pinus taeda L.): The Majority Of The 22-Gb Genome Appears To Be Highly Diverged And Nested Repetitive Elements.. Plant & Animal Genomes XVIII Conference. San Diego, CA. January 9 - January 13, 2010. Full Text.
Wegrzyn J.L., Liechty J.D., Eckert A.J., Figueroa B., Choi M., Neale D.B. 2010. Bioinformatic solutions for data storage, analysis, and interpretation in forest genomics: Overview of the tools and resources from the Dendrome Project: Computer Demonstration. Plant & Animal Genomes XVIII Conference. San Diego, CA. January 9 - January 11, 2010.
2009
Stambolia-Kovach A., Wegrzyn J.L., Cook D.R., Bruening G.E., Hartigan J., Langley C.H., Neale D.B. 2009. Plant & Animal Genomes XVII Conference. Preliminary Insights Into Genomic Sequence Of Loblolly Pine (Pinus taeda L.). San Diego, CA. January 10 - January 14, 2009. Full Text.
Stambolia-Kovach A., Eckert A.J., Wegrzyn J.L., Cook D.R., Bruening G.E., Hartigan J., Langley C.H., Neale D.B. 2009. Genomic Discovery In Loblolly Pine (Pinus taeda L.). Plant & Animal Genomes XVII Conference. San Diego, CA. January 10 - January 14, 2009. Full Text. Poster.
Eckert A.J., Wegrzyn J.L., Liechty J.D., Stevens K., Jermstad K.D., Nelson C.D., Gonzalez-Martinez S.C., Langley C.H., Neale D.B. 2009. The integration of resequencing, genotyping and population structure data reveals patterns of adaptive genetic diversity in loblolly pine. Southern Forest Tree Improvement Conference. Blacksburg, VA. June, 2009.
Cumbie P.W., Whetten R., Goldfarb B., Wegrzyn J.L., Eckert A.J., Neale D.B. 2009. Association genetics of water relations and early growth in loblolly pine.. Southern Forest Tree Improvement Conference. Blacksburg, VA. June, 2009.
Neale D.B. 2009. Association studies for complex traits in conifers. Genome Scans and Association Mapping. Workshop on Opportunities, Challenges and Limitations of Genomics-Based Technologies in Forest Tree Breeding and Forest Genetics. Forest Research Institute (FVA) Freiburg, Germany. October 9, 2009.
Neale D.B. 2009. Development and application of genomic-based tools to manage forests in response to climate change. Workshop on Opportunities, Challenges and Limitations of Genomics-Based Technologies in Forest Tree Breeding and Forest Genetics. Forest Research Institute (FVA) Freiburg, Germany. October 7, 2009.
Neale D.B. 2009. Allele Discovery for Economic Pine Traits. ADEPT2 Capstone mini symposium. Southern Forest Tree Improvement Conference. Richmond, VA. May 31 - June 2, 2009.
2008
Lee J.M., Wegrzyn J.L., Eckert A., Wolfe B., Tao W., Harris P., Stevens K., Suarez C., Langley C.H., Neale D.B. 2008. ADEPT2 – SNP Discovery Using PineSAP. Plant & Animal Genomes XVI Conference. San Diego, CA. January 12 - January 16, 2008. Full Text. Poster.
Neale D.B. 2008. Forest Tree Translational Genomics. National Plant Genome Initiative Workshop. University of California Irvine, CA. August 26 - August 28, 2008.
Neale D.B. 2008. GoldenGate and Infinium SNP Genotyping for Association Studies in Trees. Illumina Webinar Series. June 1 - June 31, 2008.
Neale D.B. 2008. Association studies with molecular markers. Breeding with molecular markers. UCDavis Extension. Davis, CA. February 1 - February 31, 2008.
Lee J., Wegrzyn J., Eckert A., Wolfe B., Tao W., Harris P., Stevens K., Suarez C., Langley C., Neale D.B. 2008. Allele Discovery of Economic Pine Traits II - SNP Discovery. Plant & Animal Genomes XVI Conference. San Diego, CA. January 12 - January 16, 2008.
2007
Eckert A., Neale D.B. 2007. Population Structure in Loblolly Pine. ADEPT2 and CTGN Annual Meeting. College Station, TX. September 1, 2007.
Wegrzyn J.L., Lee J.M., Neale D.B. 2007. Re-Sequencing and SNP Discovery. ADEPT2 and CTGN Annual Meeting. College Station, TX. January, 2007.
Lee J.M., Wegrzyn J.L., Neale D.B. 2007. Conifer Resequencing and PineSAP. Wheat SNP Meeting at UC Davis. Davis, CA. August 30, 2007.
Eckert A., Lee J., Wegrzyn J., Stevens K., Langley C., Neale D.B. 2007. ADEPT2: Re-Sequencing, SNP Discovery, and Association Studies in Loblolly Pine. Joint Meeting of the Southern Forest Tree Improvement Conference and the Western Forest Genetics Association. Galveston, TX. June 19 - June 22, 2007. Full Text.
Wegrzyn J., Lee J., Neale D.B. 2007. Association-Based Discovery and Evaluation in Loblolly Pine and Comparative Re-Sequencing. Treenomix. Vancouver, Canada. June 14, 2007.
Eckert A., Neale D.B. 2007. Population Structure and Historical Demography of Loblolly Pine: Implications for Association Studies. Plant Genomics Syposium at UC Davis. Davis, CA. June 14, 2007.
Gonzalez-Martinez S., Neale D.B. 2007. SNPs and Genetic Association. The Banbury Center, Cold Spring Harbor Laboratory. Long Island, New York. March 18 - March 21, 2007.
Lee J., Wegrzyn J., Stevens K., Eckert A., Langley C., Neale D.B. 2007. ADEPT2: Re-Sequencing and SNP Discovery in Loblolly Pine. Plant & Animal Genomes XV Conference. San Diego, CA. January 13 - January 17, 2007. Full Text.
2006
Lee J., Wegrzyn J., Eckert A., Neale D.B. 2006. ADEPT2: Association Discovery and Evaluation in Pinus Taeda. NFGEL. December 15, 2006.
Neale D.B. 2006. UC Davis Department of Plant Sciences and the Institute of Forest Genetics: Conifer Genomics. Forest Genetics Retreat. Placerville, CA. December 8, 2006.

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