Neale Lab

Summary of ADEPT2

Our long term goal is to genetically dissect complex traits and understand the relationship between naturally occurring genetic and phenotypic variation in forest trees. In this project we will identify relationships between naturally occurring genetic and phenotypic variation in Pinus taeda...

FTP site now live to obtain annotated and raw sequence datasets.
241,796 reads submitted to the Trace Archive
6,178 amplicons to the PopSets repository via tbl2asn program
Illumina Webinar Series: GoldenGate and Infinium SNP Genotyping for Association Studies in Trees

Research

Members

Partcipating Organizations

Upcoming Events

July 22-25, 2013
Forest Genetics 2013 - Canadian Forest Genetics Assoc; WFGA; IUFRO Population, Ecological & Conservation Genetics; IUFRO Breeding PNW Conifers
Hilton Hotel, Whistler, BC, Canada

More information

Latest Publications

Eckert A.J., Wegrzyn J.L., Cumbie W.P., Goldfarb B., Huber D.A., Tolstikoc V., Fiehn O., Neale D.B. (2012) Association genetics of the loblolly pine (Pinus taeda, Pinaceae) metabolome. New Phytologist. 193:890-902. Full Text.

Li Z., Gopal V., Li X., Davis J.M., Casella G. (2012) Simultaneous SNP Identification in Association Studies with Missing Data. Annals of Applied Statistics. 6:432-456. Full Text.

Jermstad K.D., Eckert A.J., Wegrzyn J.L., Delfino-Mix A., Davis D.A., Burton D.C., Neale D.B. (2011) Comparative mapping in Pinus: sugar pine (Pinus lambertiana Dougl.) and loblolly pine (Pinus taeda L.). Tree Genetics and Genomes. 7:457-468. Full Text.

Latest Meeting Abstracts

Stambolia-Kovach A., Wegrzyn J.L., Parra G., Holt C., Hartigan J., Nicolet C.M., Bruening G.E., Troggio M., Loopstra C., Yandell M., Korf I., Langley C.H., Neale D.B. 2010. Whole Genome Shotgun And BAC Sequences In Loblolly Pine (Pinus taeda L.): The Majority Of The 22-Gb Genome Appears To Be Highly Diverged And Nested Repetitive Elements.. Plant & Animal Genomes XVIII Conference. January 9 - January 13, 2010. Information.