/*
   AjaxSearch
   by Brandon Tearse
   Designed for use with the TreeGenes Database Interface.
        
   Started: 8/06
   This Release: 9/06
   Codename: Prototype

   Extensively uses the Dojo Toolkit (www.dojotoolkit.org) which is released under both the AFL 2.1 and BSD License
   Toolkit expanded upon and modified by Brandon Tearse for use with the TreeGenes Database Interface.

   *************************
   
   AjaxSearch provides the input information for the Search Windows
   
*/

var GLOBALSearches = [
	{
		content:[
			['BULK_KEYWORD_SEARCH','sequence','FASTA Sequence:','(Ex: GCATAG...)'],
			['BULK_KEYWORD_SEARCH','est_name','EST Name:','(Ex: NXCI_123_A01_F)'],
			['BULK_KEYWORD_SEARCH','genbank_accession','GenBank Accession:','(Ex: DR746395)'],
			['BULK_KEYWORD_SEARCH','genbank_gi','GenBank GI:','(Ex: 57881396)'],
			['TREESAMPLE_SPECIES_SELECTOR','species_filter','Select the species of interest:']
		],
		identifier:'est',
	    title:'EST (GenBank)'
	},
	{
		content:[
			['BULK_KEYWORD_SEARCH','sequence','FASTA Sequence:','(Ex: GCATAG...)'],
			['BULK_KEYWORD_SEARCH','contig_name','EST Contig ID:','(Ex: 0_8156)'],
			['BULK_KEYWORD_SEARCH','genbank_accession','BLAST GenBank Accession:','(Ex: ADE75655)'],
			['BULK_KEYWORD_SEARCH','genbank_gi','BLAST GenBank GI:','(Ex: 224284550)'],
			['KEYWORD_SEARCH','blast_hit','BLAST Hit:','(Ex: ATPase)'],
			['KEYWORD_SEARCH','go_term','GO Term:','(Ex: Heat shock)'],
			['KEYWORD_SEARCH','interpro_term','InterPro Term:','(Ex: Lipid)'],
			['KEYWORD_SEARCH','expasy_enzyme','Enzyme:','(Ex: ATP)'],
			['SPECIES_SELECTOR','species_filter','Mark all species of interest:']
		],
		identifier:'contig',
		title:'Contig'
	},
	{
		content:[
			['BULK_KEYWORD_SEARCH','amplicon_name','Amplicon Name:','(Ex: 0_8156_02)'],
			['KEYWORD_SEARCH','blast_hit','BLAST Hit:','(Ex: ATPase)'],
			['KEYWORD_SEARCH','go_term','GO Term:','(Ex: Heat shock)'],
			['KEYWORD_SEARCH','expasy_enzyme','Enzyme:','(Ex: ATP)']
		],
		identifier:'amplicon',
		title:'Amplicon'
	},
	{
		content:[
			['BULK_KEYWORD_SEARCH','treesample_identifier','Tree Identifier:','(Ex: T1782)'],
			['TREESAMPLE_SPECIES_SELECTOR','species_filter','Select the species of interest:']
		],
		identifier:'treesamples',
		title:'Tree / Phenotypes'
	},
	{
		content:[
			['BULK_KEYWORD_SEARCH','sequence','FASTA Sequence:','(Ex: GCATAG...)'],
			['KEYWORD_SEARCH','sequence_name','Sequence Name:','(0_8156_02-8008_Pt-F)']
		],
		identifier:'sequencingchromat',
		title:'Seq Chromats'
	},
	{
		content:[
			['BULK_KEYWORD_SEARCH','sequence','FASTA Sequence:','(Ex: GCATAG...)'],
			['BULK_KEYWORD_SEARCH','sequence_id','Sequence ID:','(Ex: 0_4643_02)'],
			['SPECIES_SELECTOR','species_filter','Mark all species of interest:']
		],
		identifier:'seqalignment',
		title:'Sequence Alignments'
	},
	{
		content:[
			['BULK_KEYWORD_SEARCH','snp_sequence_id','Sequence ID:','(Ex: 0_8156_02)'],
			['BULK_KEYWORD_SEARCH','snp_est_contig','EST Contig ID:','(Ex: 0_8156)'],
			['BULK_KEYWORD_SEARCH','snp_id','SNP ID:','(SNP_139667-Pita)'],
			['SPECIES_SELECTOR','species_filter','Mark all species of interest:']
		],
		identifier:'snp',
		title:'SNP'
	},
	{
		content:[
			['BULK_KEYWORD_SEARCH','sequence','FASTA Sequence:','(Ex: GCATAG...)'],
			['KEYWORD_SEARCH','primer_name','Primer Name:','(Ex: 0_8156_02_F)']
		],
		identifier:'primer',
		title:'Primer'
	}
];


/********** DELETED 1/7/201 **********
,
	{
		content:[
			['KEYWORD_SEARCH','sequencingreaction_name','Seq Rxn Name:','(Ex: 412_01_F)']
		],
		identifier:'sequencingreaction',
		title:'Sequencing Rxn'
	}
*********************************************************************************/


/********** Excluded in order to avoid confusion (but still functional) **********

	{
		content:[['go_term','Term:'],['go_id','Accession #:']],
		identifier:'goterms',
		title:'GO Term'
	},
	{
		content:[['ec_number','EC Number:']],
		identifier:'expasyenzyme',
		title:'ExPASy Enzyme'
	},



	{
		content:[
			['KEYWORD_SEARCH','dnaextractions_date','Extraction Date:','']
		],
		identifier:'dnaextractions',
		title:'DNA Extractions'
	},


,
	{
		content:[
			['KEYWORD_SEARCH','phenotype','Phenotype:','']
		],
		identifier:'phenotype',
		title:'Phenotype'
	},
	{
		content:[
			['KEYWORD_SEARCH','pdata_phen','Either Phenotype:',''],
			['KEYWORD_SEARCH','pdata_samp','Or Tree Sample:','']
		],
		identifier:'pdata',
		title:'Phenotype Data'
	}
*********************************************************************************/